Detailed information of deep learning profile BP001230.1

This page shows detailed deep learning-derived predictions and motifs for IRF2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IRF2
Model ID: BP001230.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Best Match(es): MA0051.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P14316  
Source: ENCSR645ZWR
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.79e-03 -9.31e-05 -6.38e-05 1.24e-04 -2.66e-05 -5.15e-06 6.59e-03 -9.09e-05 0.00e+00 -2.16e-05 1.09e-04 0.00e+00 1.93e-03 -1.38e-04 -5.19e-05 -1.89e-05 -4.44e-05 -2.95e-04 ]
C [ 1.09e-04 5.30e-03 5.13e-05 -5.92e-05 1.89e-05 1.55e-02 0.00e+00 7.88e-03 1.79e-06 0.00e+00 1.34e-05 1.67e-02 -4.67e-04 2.80e-03 -6.43e-05 -1.21e-04 4.59e-04 2.75e-03 ]
G [ 5.14e-04 2.23e-03 3.02e-05 -1.19e-05 1.03e-05 -6.69e-06 2.62e-03 1.26e-03 1.37e-04 8.21e-05 -2.61e-06 3.33e-05 3.97e-03 1.46e-04 9.69e-05 -1.79e-05 -6.07e-05 1.45e-04 ]
T [ -4.53e-04 -8.39e-05 9.72e-03 9.13e-03 1.19e-02 -2.54e-06 -2.53e-04 -1.05e-04 1.73e-02 1.61e-02 1.44e-02 -2.39e-04 -7.33e-04 -4.86e-04 9.40e-03 8.81e-03 4.43e-03 -1.53e-03 ]

Frequency matrix

A [ 156 20 13 8 1 5 199 6 0 2 0 2 103 32 15 13 12 69 ]
C [ 44 200 20 32 19 289 19 223 0 1 7 291 59 150 24 32 74 137 ]
G [ 92 101 21 9 16 5 99 81 0 1 3 13 128 61 20 11 22 42 ]
T [ 37 8 275 280 293 30 12 19 329 325 319 23 39 86 270 273 221 81 ]

2 profiles found for the same TF (IRF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000908.1 IRF2 ENCSR604UJV HepG2 Homo sapiens
BP000925.1 IRF2 ENCSR376WCJ K562 Homo sapiens
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