This page shows detailed deep learning-derived predictions and motifs for CTCF in pancreas using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001233.1 |
| Cell line/tissue: | pancreas |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR253ALG |
| Model: | BPNet |
| A [ | -1.29e-03 | -6.09e-04 | 2.55e-02 | -1.34e-03 | -5.03e-03 | 7.85e-02 | -3.75e-04 | 1.66e-02 | -2.90e-03 | -7.67e-04 | -1.19e-03 | -2.14e-03 | 8.42e-03 | -2.44e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.69e-02 | 1.64e-01 | -5.60e-04 | 5.89e-02 | 1.55e-02 | -2.09e-04 | -3.50e-05 | -8.26e-05 | -2.70e-04 | -6.10e-05 | 5.11e-04 | 7.86e-02 | -4.70e-04 | 2.56e-02 | ] |
| G [ | -1.61e-03 | -2.08e-04 | 7.03e-03 | 1.02e-02 | -2.18e-03 | 2.67e-04 | 1.60e-01 | 6.48e-02 | 4.86e-02 | 1.48e-01 | 9.89e-02 | -7.13e-05 | 4.86e-02 | 1.12e-02 | ] |
| T [ | -2.43e-03 | -4.89e-04 | -4.49e-03 | -1.46e-03 | 1.97e-02 | -1.93e-03 | -1.98e-04 | -3.87e-04 | 6.52e-03 | -4.67e-04 | -3.78e-04 | -2.71e-03 | -2.52e-03 | -1.11e-03 | ] |
| A [ | 2411 | 2 | 21294 | 1349 | 4375 | 25576 | 161 | 11638 | 1444 | 361 | 879 | 4191 | 12262 | 3070 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 24156 | 29590 | 940 | 17839 | 12066 | 782 | 39 | 229 | 1022 | 138 | 1194 | 21793 | 1575 | 14375 | ] |
| G [ | 1438 | 0 | 3944 | 9671 | 2112 | 1851 | 29304 | 17482 | 16442 | 28825 | 25088 | 1020 | 14264 | 9318 | ] |
| T [ | 1588 | 1 | 3415 | 734 | 11040 | 1384 | 89 | 245 | 10685 | 269 | 2431 | 2589 | 1491 | 2830 | ] |
