This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001235.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR385CDF |
| Model: | BPNet |
| A [ | -2.28e-03 | -2.20e-03 | -8.24e-04 | -1.23e-03 | 6.11e-04 | -6.62e-04 | -2.14e-04 | -1.58e-03 | 2.09e-02 | -1.49e-03 | -4.38e-03 | -3.79e-04 | -1.64e-03 | -3.63e-03 | -2.50e-03 | 9.44e-03 | 1.59e-03 | 4.13e-03 | 1.37e-03 | -1.17e-03 | -1.22e-03 | -4.04e-05 | 1.54e-04 | 3.11e-03 | 2.60e-02 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 2.69e-02 | -2.56e-04 | 6.50e-02 | 1.15e-01 | 4.51e-02 | 7.96e-02 | 1.60e-01 | 6.27e-04 | -1.43e-03 | 9.76e-03 | 2.92e-03 | -1.73e-04 | -1.47e-03 | 1.32e-02 | 9.62e-03 | -2.24e-03 | -8.11e-05 | -1.05e-03 | -2.30e-04 | -1.09e-03 | -9.82e-04 | -1.25e-03 | -2.87e-03 | -2.29e-03 | -1.14e-03 | ] |
| G [ | 7.85e-04 | 4.56e-02 | 6.95e-04 | -3.68e-04 | -1.46e-04 | -1.00e-04 | -5.60e-05 | -3.35e-04 | 1.50e-02 | 5.94e-02 | -3.69e-04 | 1.55e-01 | 1.04e-01 | -2.08e-03 | 5.43e-03 | 1.37e-02 | 2.56e-03 | -1.20e-03 | -4.52e-04 | 2.53e-03 | 5.44e-03 | 1.15e-02 | 2.65e-02 | 7.75e-04 | -2.84e-03 | ] |
| T [ | 2.97e-03 | -7.04e-04 | -1.58e-03 | -1.47e-03 | -3.59e-03 | 4.51e-03 | -2.15e-04 | 7.53e-02 | -3.96e-03 | -9.41e-04 | 3.11e-02 | -6.01e-04 | -1.05e-03 | 6.61e-03 | -4.51e-03 | -4.18e-03 | -1.76e-03 | 1.75e-04 | 2.41e-04 | 8.97e-04 | -4.20e-04 | -2.00e-03 | -1.71e-03 | 2.57e-03 | -3.79e-04 | ] |
| A [ | 3984 | 4754 | 4128 | 2187 | 10098 | 672 | 0 | 1344 | 14197 | 690 | 4721 | 1 | 648 | 6399 | 7859 | 15027 | 9860 | 11735 | 9869 | 8074 | 7591 | 9304 | 8319 | 11088 | 17654 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12292 | 3073 | 22933 | 29060 | 19131 | 23187 | 33541 | 2001 | 1369 | 9564 | 1982 | 0 | 410 | 13020 | 11532 | 3139 | 7346 | 5786 | 6409 | 6980 | 6420 | 4554 | 3752 | 6433 | 5867 | ] |
| G [ | 4344 | 18509 | 2938 | 1081 | 1218 | 121 | 0 | 412 | 13117 | 21665 | 948 | 33538 | 30890 | 2995 | 7375 | 11383 | 8640 | 6785 | 8059 | 8835 | 10433 | 12081 | 15679 | 7538 | 4172 | ] |
| T [ | 12923 | 7207 | 3544 | 1215 | 3096 | 9563 | 2 | 29786 | 4859 | 1624 | 25893 | 4 | 1595 | 11128 | 6777 | 3994 | 7698 | 9237 | 9206 | 9654 | 9098 | 7605 | 5793 | 8484 | 5850 | ] |
