Detailed information of deep learning profile BP001236.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in IMR-90 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP001236.1
Cell line/tissue: IMR-90
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0526.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR513UQG
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.24e-03 -1.07e-03 -2.70e-06 8.85e-02 -2.26e-06 8.69e-03 -4.24e-04 -6.46e-06 7.94e-03 -2.60e-03 ]
C [ -5.99e-04 1.88e-03 1.25e-01 -1.86e-05 9.66e-02 -7.06e-05 2.35e-04 6.95e-06 -8.70e-04 1.84e-02 ]
G [ 3.00e-02 -5.60e-04 3.70e-05 7.04e-05 2.95e-06 6.22e-02 -4.42e-04 1.20e-01 4.51e-03 2.75e-04 ]
T [ -1.03e-03 2.83e-02 8.47e-07 -1.84e-05 2.68e-04 -2.98e-05 7.38e-02 -2.55e-05 -2.10e-03 2.14e-03 ]

Frequency matrix

A [ 10830 4449 158 38047 16 13424 2316 36 13302 4302 ]
C [ 8229 13477 42308 1126 41544 1970 2151 118 9231 18692 ]
G [ 19833 7963 57 2022 349 26765 2107 41841 14683 9050 ]
T [ 3640 16643 9 1337 623 373 35957 537 5316 10488 ]

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000226.1 USF2 ENCSR000EHG K562 Homo sapiens
BP000417.1 USF2 ENCSR145QNL HepG2 Homo sapiens
BP000448.1 USF2 ENCSR000EEF HepG2 Homo sapiens
BP000548.1 USF2 ENCSR563FBT A549 Homo sapiens
BP000554.1 USF2 ENCSR359NFW K562 Homo sapiens
BP000793.1 USF2 ENCSR000ECW HeLa-S3 Homo sapiens
BP000809.1 USF2 ENCSR000DZU GM12878 Homo sapiens
BP000863.1 USF2 ENCSR578KEN K562 Homo sapiens
BP000966.1 USF2 ENCSR000ECD H1 Homo sapiens
BP001081.1 USF2 ENCSR945NFL SK-N-SH Homo sapiens
Showing 10 profiles of page 1 from 2 pages