Detailed information of deep learning profile BP001236.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in IMR-90 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP001236.1
Cell line/tissue: IMR-90
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0526.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR513UQG
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.24e-03 -1.07e-03 -2.70e-06 8.85e-02 -2.26e-06 8.69e-03 -4.24e-04 -6.46e-06 7.94e-03 -2.60e-03 ]
C [ -5.99e-04 1.88e-03 1.25e-01 -1.86e-05 9.66e-02 -7.06e-05 2.35e-04 6.95e-06 -8.70e-04 1.84e-02 ]
G [ 3.00e-02 -5.60e-04 3.70e-05 7.04e-05 2.95e-06 6.22e-02 -4.42e-04 1.20e-01 4.51e-03 2.75e-04 ]
T [ -1.03e-03 2.83e-02 8.47e-07 -1.84e-05 2.68e-04 -2.98e-05 7.38e-02 -2.55e-05 -2.10e-03 2.14e-03 ]

Frequency matrix

A [ 10830 4449 158 38047 16 13424 2316 36 13302 4302 ]
C [ 8229 13477 42308 1126 41544 1970 2151 118 9231 18692 ]
G [ 19833 7963 57 2022 349 26765 2107 41841 14683 9050 ]
T [ 3640 16643 9 1337 623 373 35957 537 5316 10488 ]

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001168.1 USF2 ENCSR229QAN WTC11 Homo sapiens
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