Detailed information of deep learning profile BP001236.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in IMR-90 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP001236.1
Cell line/tissue: IMR-90
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0526.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR513UQG
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.14e-03 -2.10e-03 -2.55e-05 7.38e-02 -2.98e-05 2.68e-04 -1.84e-05 8.47e-07 2.83e-02 -1.03e-03 ]
C [ 2.75e-04 4.51e-03 1.20e-01 -4.42e-04 6.22e-02 2.95e-06 7.04e-05 3.70e-05 -5.60e-04 3.00e-02 ]
G [ 1.84e-02 -8.70e-04 6.95e-06 2.35e-04 -7.06e-05 9.66e-02 -1.86e-05 1.25e-01 1.88e-03 -5.99e-04 ]
T [ -2.60e-03 7.94e-03 -6.46e-06 -4.24e-04 8.69e-03 -2.26e-06 8.85e-02 -2.70e-06 -1.07e-03 4.24e-03 ]

Frequency matrix

A [ 10488 5316 537 35957 373 623 1337 9 16643 3640 ]
C [ 9050 14683 41841 2107 26765 349 2022 57 7963 19833 ]
G [ 18692 9231 118 2151 1970 41544 1126 42308 13477 8229 ]
T [ 4302 13302 36 2316 13424 16 38047 158 4449 10830 ]

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000226.1 USF2 ENCSR000EHG K562 Homo sapiens
BP000417.1 USF2 ENCSR145QNL HepG2 Homo sapiens
BP000448.1 USF2 ENCSR000EEF HepG2 Homo sapiens
BP000548.1 USF2 ENCSR563FBT A549 Homo sapiens
BP000554.1 USF2 ENCSR359NFW K562 Homo sapiens
BP000793.1 USF2 ENCSR000ECW HeLa-S3 Homo sapiens
BP000809.1 USF2 ENCSR000DZU GM12878 Homo sapiens
BP000863.1 USF2 ENCSR578KEN K562 Homo sapiens
BP000966.1 USF2 ENCSR000ECD H1 Homo sapiens
BP001081.1 USF2 ENCSR945NFL SK-N-SH Homo sapiens
Showing 10 profiles of page 1 from 2 pages