This page shows detailed deep learning-derived predictions and motifs for CTCF in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001238.1 |
| Cell line/tissue: | liver |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR254YRM |
| Model: | BPNet |
| A [ | -1.55e-03 | -2.84e-03 | -2.62e-03 | -3.62e-04 | -2.95e-04 | 5.39e-03 | -4.17e-04 | -2.16e-04 | -2.00e-03 | 1.62e-02 | -1.87e-03 | -5.03e-03 | -4.28e-04 | -3.02e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.36e-03 | 4.01e-02 | -7.98e-04 | 9.19e-02 | 1.35e-01 | 4.20e-02 | 5.83e-02 | 1.50e-01 | 2.86e-04 | -1.68e-03 | 1.23e-02 | 4.67e-03 | -2.13e-04 | -1.47e-03 | ] |
| G [ | 2.49e-02 | -6.35e-04 | 7.25e-02 | -5.18e-04 | -3.34e-07 | -2.79e-04 | -8.66e-05 | -4.67e-05 | -1.87e-04 | 1.31e-02 | 4.89e-02 | -5.33e-04 | 1.51e-01 | 7.64e-02 | ] |
| T [ | -2.45e-03 | 8.60e-03 | -2.85e-03 | -8.83e-04 | -5.82e-04 | -3.26e-03 | 1.81e-02 | -2.96e-04 | 6.60e-02 | -4.93e-03 | -1.61e-03 | 2.34e-02 | -5.12e-04 | -1.17e-03 | ] |
| A [ | 4015 | 2181 | 3444 | 3190 | 332 | 15044 | 375 | 191 | 2475 | 14207 | 1295 | 5472 | 0 | 2641 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12645 | 18991 | 1148 | 35086 | 39315 | 21093 | 23677 | 39568 | 3235 | 3358 | 14471 | 4982 | 1 | 2646 | ] |
| G [ | 19331 | 2125 | 29830 | 1111 | 94 | 1618 | 379 | 99 | 1204 | 16367 | 22090 | 1785 | 40213 | 30931 | ] |
| T [ | 4224 | 16919 | 5793 | 828 | 474 | 2460 | 15785 | 357 | 33301 | 6284 | 2359 | 27976 | 1 | 3996 | ] |
