This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001245.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR575WYM |
| Model: | BPNet |
| A [ | -1.91e-03 | -5.38e-04 | 2.70e-02 | -2.54e-03 | -7.11e-03 | 8.04e-02 | -5.22e-04 | 2.06e-02 | -4.60e-03 | -8.83e-04 | -1.67e-03 | -3.77e-03 | 1.01e-02 | -3.19e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.03e-01 | 1.96e-01 | -8.75e-04 | 7.09e-02 | 1.78e-02 | -7.70e-05 | -4.27e-05 | -3.20e-06 | 2.50e-04 | -6.86e-05 | 2.98e-04 | 1.08e-01 | -6.70e-04 | 3.56e-02 | ] |
| G [ | -2.07e-03 | -2.80e-04 | 7.96e-03 | 1.40e-02 | -2.36e-03 | 9.36e-04 | 2.03e-01 | 7.36e-02 | 6.10e-02 | 1.93e-01 | 1.26e-01 | -7.34e-04 | 6.14e-02 | 1.39e-02 | ] |
| T [ | -3.60e-03 | -4.80e-04 | -6.86e-03 | -2.25e-03 | 2.32e-02 | -3.08e-03 | -3.95e-04 | -5.66e-04 | 8.84e-03 | -5.97e-04 | -4.13e-04 | -3.78e-03 | -3.94e-03 | -1.91e-03 | ] |
| A [ | 3681 | 13 | 26523 | 2146 | 6190 | 31702 | 331 | 15480 | 2121 | 510 | 1121 | 5575 | 15925 | 3906 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 29936 | 38708 | 1755 | 22186 | 14877 | 1319 | 70 | 467 | 1577 | 130 | 1777 | 28410 | 2052 | 18794 | ] |
| G [ | 2506 | 6 | 5160 | 13136 | 3140 | 3218 | 38163 | 22336 | 21169 | 37735 | 32440 | 1469 | 18696 | 12050 | ] |
| T [ | 2612 | 7 | 5297 | 1267 | 14527 | 2494 | 170 | 451 | 13867 | 359 | 3395 | 3279 | 2062 | 3984 | ] |
