This page shows detailed deep learning-derived predictions and motifs for CTCF in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001250.1 |
| Cell line/tissue: | MCF-7 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DWH |
| Model: | BPNet |
| A [ | -1.82e-03 | -1.26e-03 | 1.79e-02 | -1.32e-03 | -4.30e-03 | 6.14e-02 | -3.49e-04 | 8.34e-03 | -4.98e-03 | -1.11e-03 | -1.98e-03 | -2.50e-03 | 5.28e-03 | -2.51e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.36e-02 | 1.48e-01 | 2.53e-04 | 4.74e-02 | 1.32e-02 | -2.82e-04 | -5.32e-05 | -1.90e-04 | -2.17e-04 | 1.34e-05 | 2.51e-03 | 6.23e-02 | 1.49e-03 | 2.39e-02 | ] |
| G [ | -1.66e-03 | -4.24e-04 | 5.16e-03 | 1.17e-02 | -1.70e-03 | 1.56e-03 | 1.50e-01 | 6.87e-02 | 4.57e-02 | 1.33e-01 | 8.12e-02 | 8.35e-04 | 3.82e-02 | 7.55e-03 | ] |
| T [ | -2.33e-03 | -7.81e-04 | -5.04e-03 | -1.88e-03 | 1.83e-02 | -2.05e-03 | -3.27e-04 | -7.39e-04 | 3.52e-03 | -9.14e-04 | -9.57e-04 | -2.64e-03 | -3.11e-03 | -7.77e-04 | ] |
| A [ | 5502 | 25 | 44066 | 3718 | 10381 | 51800 | 29 | 22918 | 5130 | 1195 | 3512 | 12131 | 25612 | 8251 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 51002 | 63016 | 2142 | 34637 | 23394 | 1185 | 7 | 418 | 1672 | 588 | 5407 | 40550 | 6503 | 26968 | ] |
| G [ | 2988 | 1 | 5416 | 22706 | 4894 | 5382 | 62996 | 38726 | 35035 | 60127 | 47753 | 3895 | 25397 | 18656 | ] |
| T [ | 3557 | 7 | 11425 | 1988 | 24379 | 4682 | 17 | 987 | 21212 | 1139 | 6377 | 6473 | 5537 | 9174 | ] |
