This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001255.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 MA1929.1 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DNA |
| Model: | BPNet |
| A [ | -2.67e-03 | -1.39e-03 | 1.70e-02 | -1.94e-03 | -5.96e-03 | 5.86e-02 | -5.12e-04 | 1.06e-02 | -5.93e-03 | -1.05e-03 | -1.99e-03 | -5.13e-03 | 4.70e-03 | -3.59e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.82e-02 | 1.69e-01 | 7.55e-04 | 5.60e-02 | 1.86e-02 | -2.01e-04 | -8.61e-05 | -1.40e-04 | -2.90e-04 | 1.93e-05 | 1.44e-03 | 9.82e-02 | 6.45e-04 | 3.95e-02 | ] |
| G [ | -1.29e-03 | -5.62e-04 | 6.44e-03 | 1.30e-02 | -1.94e-03 | 1.52e-03 | 1.73e-01 | 7.80e-02 | 5.72e-02 | 1.71e-01 | 1.16e-01 | 1.24e-04 | 6.44e-02 | 1.17e-02 | ] |
| T [ | -3.35e-03 | -1.11e-03 | -7.31e-03 | -2.35e-03 | 1.44e-02 | -2.86e-03 | -4.24e-04 | -6.56e-04 | 3.93e-03 | -6.18e-04 | -1.06e-03 | -3.67e-03 | -3.87e-03 | -1.51e-03 | ] |
| A [ | 4426 | 480 | 30109 | 3033 | 7526 | 37825 | 414 | 16474 | 3943 | 608 | 1245 | 6919 | 16824 | 4515 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 37608 | 47940 | 2878 | 25830 | 20548 | 1913 | 194 | 608 | 2318 | 182 | 1875 | 36517 | 2972 | 26033 | ] |
| G [ | 3799 | 298 | 7677 | 18446 | 5313 | 5290 | 48041 | 31228 | 26766 | 47707 | 42237 | 1594 | 26406 | 13483 | ] |
| T [ | 3109 | 225 | 8280 | 1634 | 15555 | 3916 | 294 | 633 | 15916 | 446 | 3586 | 3913 | 2741 | 4913 | ] |
