Summary information of deep learning profile DL0001.1

This page shows the summary of all deep learning-derived profiles and motifs for ARNT2. Please scroll down the page to browse individual datasets.

Profile summary

Name: ARNT2
Profile ID: DL0001.1
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9HBZ2  
Source: ENCODE
Number of Datasets: 1
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ 5.61e-06 4.69e-03 0.00e+00 0.00e+00 -1.16e-05 0.00e+00 -4.02e-04 -2.44e-04 -2.92e-04 -6.82e-04 -2.82e-04 -1.72e-04 -2.75e-04 -1.80e-04 ]
C [ 1.12e-02 0.00e+00 1.47e-02 0.00e+00 4.46e-05 -5.44e-05 7.01e-04 4.61e-03 2.47e-03 1.48e-03 1.08e-03 1.42e-03 9.38e-04 2.48e-03 ]
G [ 0.00e+00 7.09e-05 0.00e+00 1.46e-02 -3.14e-06 1.11e-02 2.23e-03 1.21e-05 1.09e-03 1.33e-03 2.21e-03 1.05e-03 1.90e-03 1.42e-03 ]
T [ -8.03e-07 0.00e+00 0.00e+00 0.00e+00 4.94e-03 -1.32e-05 -2.31e-04 -2.17e-04 -6.77e-04 -3.54e-04 -3.71e-04 -3.21e-04 -2.49e-04 -4.48e-04 ]

Frequency matrix

A [ 3 2016 0 1 75 1 425 139 246 324 289 497 427 300 ]
C [ 2162 62 2167 0 29 2 624 1193 1039 722 747 649 567 838 ]
G [ 2 26 0 2166 43 2158 912 305 389 668 696 687 788 699 ]
T [ 0 63 0 0 2020 6 206 530 493 453 435 334 385 330 ]

1 models found for ARNT2

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000273.1 ARNT2 ENCSR267TGY HepG2 Homo sapiens
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