Summary information of deep learning profile DL0029.1

This page shows the summary of all deep learning-derived profiles and motifs for EGR1. Please scroll down the page to browse individual datasets.

Profile summary

Name: EGR1
Profile ID: DL0029.1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCODE
Number of Datasets: 11
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -7.04e-05 -1.18e-03 -8.41e-06 -5.23e-05 2.70e-04 1.06e-05 9.96e-07 -1.14e-03 -2.69e-04 -5.93e-04 ]
C [ -2.26e-04 2.42e-02 8.37e-06 1.37e-05 9.41e-06 1.66e-05 1.25e-05 2.44e-02 -7.43e-05 -2.50e-04 ]
G [ 2.48e-02 -8.94e-06 6.58e-02 8.78e-03 4.45e-02 5.17e-02 6.65e-02 2.88e-05 4.60e-02 1.53e-02 ]
T [ -2.53e-04 -6.92e-04 -2.12e-06 1.55e-02 -2.42e-05 1.79e-07 -2.54e-07 1.19e-03 -2.52e-04 1.33e-03 ]

Frequency matrix

A [ 98971 141951 6323 36023 69176 10956 1080 141751 31695 56137 ]
C [ 114961 317757 3746 72902 25762 20195 5147 390794 19628 77329 ]
G [ 474332 133639 724966 368063 634110 693553 729295 52865 662184 493636 ]
T [ 48198 143116 1428 259475 7415 11759 941 151053 22957 109361 ]

Alternative motif patterns (AMPs)

AMP ID: MO000054.1

Best match: MA0162.2

A [ -8.01e-05 7.15e-04 -9.71e-05 -2.15e-04 -1.54e-04 4.96e-05 -5.86e-05 -2.86e-04 -2.94e-05 -4.05e-05 -2.20e-05 5.14e-04 -9.84e-05 -5.92e-04 -7.40e-05 -2.35e-05 -3.78e-04 -2.03e-04 -3.05e-04 -1.66e-04 -1.61e-04 -2.92e-04 -4.10e-04 -2.64e-04 -1.06e-04 -2.52e-04 8.83e-06 -3.05e-04 -1.54e-04 -4.00e-05 1.03e-05 -1.58e-04 -1.61e-04 -1.51e-04 ]
C [ 9.18e-03 3.04e-03 8.29e-03 1.15e-02 2.87e-03 1.35e-02 2.02e-02 2.48e-03 2.31e-02 2.17e-02 1.01e-02 1.37e-02 2.30e-02 3.92e-03 1.25e-02 1.06e-02 2.52e-03 6.36e-03 7.49e-03 2.43e-03 4.46e-03 5.18e-03 1.88e-03 3.82e-03 4.99e-03 2.44e-03 4.76e-03 6.38e-03 3.28e-03 5.74e-03 6.07e-03 3.97e-03 5.87e-03 7.25e-03 ]
G [ 7.91e-05 2.88e-04 4.47e-04 1.55e-04 2.76e-04 1.26e-04 5.27e-05 2.49e-03 9.30e-05 9.86e-05 8.10e-04 2.70e-04 2.56e-05 2.52e-03 4.97e-04 2.90e-04 1.35e-03 7.33e-04 6.58e-04 1.29e-03 7.29e-04 7.25e-04 9.79e-04 9.05e-04 1.33e-03 1.03e-03 1.80e-03 2.02e-03 2.31e-03 9.66e-04 2.38e-03 3.39e-03 2.15e-03 1.37e-03 ]
T [ -3.19e-04 -1.60e-03 -2.70e-04 -2.32e-04 -1.58e-03 3.50e-05 -8.06e-05 -2.53e-03 -1.11e-05 -1.44e-04 -1.85e-03 -7.33e-05 -2.34e-04 -2.51e-03 -3.04e-04 -3.52e-04 -1.33e-03 -3.60e-04 -3.82e-04 -1.32e-03 -5.89e-04 -3.76e-04 -1.09e-03 -3.12e-04 -1.35e-04 -8.24e-04 -2.15e-04 -2.66e-04 -9.35e-04 1.53e-04 -3.90e-04 -1.18e-03 -5.44e-04 -3.52e-04 ]
A [ 2 21 8 3 12 2 1 17 0 0 2 1 0 19 5 14 25 9 15 34 21 33 24 23 35 29 18 31 33 26 28 43 30 42 ]
C [ 260 54 254 277 43 288 290 16 291 291 75 286 290 34 278 250 54 241 208 64 197 173 89 187 187 92 179 185 87 187 187 88 167 169 ]
G [ 11 52 18 3 56 0 0 65 0 0 10 2 0 46 4 11 52 15 20 46 41 30 57 39 28 58 52 27 65 36 42 63 57 33 ]
T [ 18 164 11 8 180 1 0 193 0 0 204 2 1 192 4 16 160 26 48 147 32 55 121 42 41 112 42 48 106 42 34 97 37 47 ]

11 models found for EGR1

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
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