Summary information of deep learning profile DL0046.1

This page shows the summary of all deep learning-derived profiles and motifs for FOXA1. Please scroll down the page to browse individual datasets.

Profile summary

Name: FOXA1
Profile ID: DL0046.1
Class: Fork head/winged helix factors
Family: FOX
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCODE
Number of Datasets: 12
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -2.10e-04 1.18e-02 1.83e-05 -2.03e-05 1.03e-05 5.57e-02 3.61e-06 7.66e-03 -9.98e-04 1.18e-02 ]
C [ -4.60e-05 -7.46e-05 -6.47e-05 3.85e-07 2.70e-05 2.16e-05 4.05e-02 -6.62e-04 4.47e-03 -5.48e-04 ]
G [ -7.08e-05 3.65e-02 3.90e-06 1.04e-03 5.35e-03 9.67e-04 -3.84e-05 -9.95e-05 -7.47e-04 -3.22e-04 ]
T [ 4.39e-02 7.60e-07 5.96e-02 4.28e-02 3.87e-02 -7.92e-05 1.12e-03 4.17e-03 9.50e-03 3.66e-03 ]

Frequency matrix

A [ 35119 162952 3597 9558 9614 558151 31942 229426 85495 253515 ]
C [ 12933 5995 4700 5828 6720 2744 450737 109756 153461 47896 ]
G [ 12494 421390 1950 69195 130632 27001 9860 17993 88108 66226 ]
T [ 532967 3178 583267 508933 446548 5618 100975 236339 266450 225876 ]

Alternative motif patterns (AMPs)

AMP ID: MO000080.1

Best match: MA0148.1

A [ 4.70e-03 1.04e-02 8.38e-03 6.29e-03 -1.10e-04 5.35e-02 4.67e-02 5.44e-02 1.36e-06 4.09e-02 ]
C [ -6.53e-05 -4.26e-04 -9.90e-05 -1.79e-04 2.72e-02 6.58e-05 1.38e-05 3.51e-06 3.88e-02 -9.85e-06 ]
G [ -1.51e-04 4.78e-03 -2.15e-04 1.35e-02 -4.14e-06 1.98e-06 6.32e-06 -7.25e-07 7.15e-06 1.78e-06 ]
T [ 1.12e-02 -4.14e-04 2.39e-03 -1.01e-04 9.97e-04 3.68e-05 3.19e-05 3.40e-06 5.65e-03 -7.13e-05 ]
A [ 147980 162627 160056 140076 31355 319546 312462 325793 8920 310322 ]
C [ 33798 40939 25603 22994 253022 6785 13935 112 241061 3464 ]
G [ 21930 82027 63801 121672 6691 50 139 474 6739 4076 ]
T [ 123283 41399 77530 42250 35923 610 455 612 70270 9129 ]

12 models found for FOXA1

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001046.1 FOXA1 ENCSR000BPX A549 Homo sapiens
BP001104.1 FOXA1 ENCSR865RXA HepG2 Homo sapiens
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