Summary information of deep learning profile DL0046.1

This page shows the summary of all deep learning-derived profiles and motifs for FOXA1. Please scroll down the page to browse individual datasets.

Profile summary

Name: FOXA1
Profile ID: DL0046.1
Class: Fork head/winged helix factors
Family: FOX
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCODE
Number of Datasets: 12
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -2.10e-04 1.18e-02 1.83e-05 -2.03e-05 1.03e-05 5.57e-02 3.61e-06 7.66e-03 -9.98e-04 1.18e-02 ]
C [ -4.60e-05 -7.46e-05 -6.47e-05 3.85e-07 2.70e-05 2.16e-05 4.05e-02 -6.62e-04 4.47e-03 -5.48e-04 ]
G [ -7.08e-05 3.65e-02 3.90e-06 1.04e-03 5.35e-03 9.67e-04 -3.84e-05 -9.95e-05 -7.47e-04 -3.22e-04 ]
T [ 4.39e-02 7.60e-07 5.96e-02 4.28e-02 3.87e-02 -7.92e-05 1.12e-03 4.17e-03 9.50e-03 3.66e-03 ]

Frequency matrix

A [ 35119 162952 3597 9558 9614 558151 31942 229426 85495 253515 ]
C [ 12933 5995 4700 5828 6720 2744 450737 109756 153461 47896 ]
G [ 12494 421390 1950 69195 130632 27001 9860 17993 88108 66226 ]
T [ 532967 3178 583267 508933 446548 5618 100975 236339 266450 225876 ]

Alternative motif patterns (AMPs)

AMP ID: MO000080.1

Best match: MA0148.1

A [ 4.70e-03 1.04e-02 8.38e-03 6.29e-03 -1.10e-04 5.35e-02 4.67e-02 5.44e-02 1.36e-06 4.09e-02 ]
C [ -6.53e-05 -4.26e-04 -9.90e-05 -1.79e-04 2.72e-02 6.58e-05 1.38e-05 3.51e-06 3.88e-02 -9.85e-06 ]
G [ -1.51e-04 4.78e-03 -2.15e-04 1.35e-02 -4.14e-06 1.98e-06 6.32e-06 -7.25e-07 7.15e-06 1.78e-06 ]
T [ 1.12e-02 -4.14e-04 2.39e-03 -1.01e-04 9.97e-04 3.68e-05 3.19e-05 3.40e-06 5.65e-03 -7.13e-05 ]
A [ 147980 162627 160056 140076 31355 319546 312462 325793 8920 310322 ]
C [ 33798 40939 25603 22994 253022 6785 13935 112 241061 3464 ]
G [ 21930 82027 63801 121672 6691 50 139 474 6739 4076 ]
T [ 123283 41399 77530 42250 35923 610 455 612 70270 9129 ]

12 models found for FOXA1

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000233.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens
BP000287.1 FOXA1 ENCSR000BMO HepG2 Homo sapiens
BP000429.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens
BP000465.1 FOXA1 ENCSR324RCI liver Homo sapiens
BP000621.1 FOXA1 ENCSR000BKY T47D Homo sapiens
BP000807.1 FOXA1 ENCSR000BRD A549 Homo sapiens
BP000816.1 FOXA1 ENCSR819LHG K562 Homo sapiens
BP000880.1 FOXA1 ENCSR000BLE HepG2 Homo sapiens
BP000958.1 FOXA1 ENCSR735KEY liver Homo sapiens
BP001033.1 FOXA1 ENCSR094WHO HEK293T Homo sapiens
Showing 10 profiles of page 1 from 2 pages