Summary information of deep learning profile DL0056.1

This page shows the summary of all deep learning-derived profiles and motifs for GATA3. Please scroll down the page to browse individual datasets.

Profile summary

Name: GATA3
Profile ID: DL0056.1
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P23771  
Source: ENCODE
Number of Datasets: 4
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ 4.00e-03 1.73e-03 7.17e-03 5.70e-03 6.68e-03 1.89e-03 3.21e-03 2.27e-03 6.62e-04 1.28e-03 2.23e-04 1.81e-02 -5.52e-07 7.17e-02 0.00e+00 2.10e-02 1.87e-02 -2.07e-04 4.28e-03 1.44e-03 2.54e-03 5.31e-04 1.09e-03 2.16e-03 2.55e-03 7.40e-03 7.71e-03 3.60e-03 ]
C [ 1.65e-03 1.62e-03 1.37e-03 1.31e-03 1.65e-03 1.46e-03 8.67e-04 7.64e-04 1.16e-03 1.49e-03 2.91e-03 4.68e-05 2.71e-06 0.00e+00 -7.02e-07 1.28e-03 -2.65e-04 1.34e-03 7.98e-04 6.75e-04 1.70e-03 1.73e-03 1.80e-03 9.78e-04 1.11e-03 8.04e-04 7.27e-04 1.03e-03 ]
G [ 1.02e-03 4.86e-03 6.09e-03 6.88e-03 2.87e-03 2.41e-03 1.10e-03 1.07e-03 8.30e-04 -5.94e-05 1.25e-03 -6.55e-05 7.62e-02 4.68e-07 1.83e-06 3.30e-04 7.57e-04 5.78e-03 5.40e-04 7.91e-04 2.30e-04 1.61e-03 1.40e-03 1.48e-03 7.56e-03 8.75e-03 1.24e-03 7.05e-04 ]
T [ 2.82e-03 4.04e-03 1.71e-03 6.01e-03 5.94e-03 7.71e-03 2.04e-03 2.46e-03 1.65e-03 9.37e-04 -1.81e-04 1.00e-03 1.23e-05 0.00e+00 7.35e-02 5.90e-04 2.01e-04 1.52e-05 -2.98e-04 1.78e-03 1.06e-03 2.54e-03 5.78e-04 1.63e-03 1.24e-03 1.01e-03 7.93e-03 8.55e-03 ]

Frequency matrix

A [ 133967 131958 131078 123621 129344 126211 125166 133482 121810 138165 113348 290195 820 420416 198 211976 246383 126245 164351 144740 130297 128625 133139 134623 137731 139295 135185 134064 ]
C [ 73121 72705 71592 76163 73717 79564 77701 76613 84043 81440 129905 9657 819 57 1132 46479 31970 86206 65433 69988 86873 90376 78183 72015 70792 70656 74484 75388 ]
G [ 95962 89762 88327 96252 95953 87106 90941 92336 89579 87158 96595 12243 419085 80 98 60206 62147 115892 95095 86928 85244 86487 84739 89644 97886 95970 86874 83460 ]
T [ 117814 126439 129866 124828 121851 127982 127056 118433 125433 114101 81016 108769 140 311 419436 102203 80364 92520 95985 119208 118450 115377 124803 124582 114455 114943 124320 127953 ]

4 models found for GATA3

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000419.1 GATA3 ENCSR000BTH SK-N-SH Homo sapiens
BP000597.1 GATA3 ENCSR423RTK MCF-7 Homo sapiens
BP000827.1 GATA3 ENCSR000BST MCF-7 Homo sapiens
BP001107.1 GATA3 ENCSR000BMX T47D Homo sapiens
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