JASPAR - MEIS2 - DL0093.1 - profile summary

This page shows the summary of all deep learning-derived profiles and motifs for MEIS2. Please scroll down the page to browse individual datasets.

Profile summary

Name:	MEIS2
Profile ID:	DL0093.1
Class:	Homeo domain factors
Family:	TALE-type homeo domain factors
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O14770
Source:	ENCODE
Number of Datasets:	2
Models:	BPNet

Sequence logo

Primary motif pattern (PMP) ID: MO000160.1

Best match: MA0774.1

Contribution weight matrix (CWM)

A [	1.19e-03	4.65e-05	-3.96e-05	3.79e-05	1.55e-02	-1.39e-05	1.04e-02	-1.88e-04	1.56e-03	-7.00e-04	]
C [	5.32e-04	1.71e-03	4.31e-05	1.59e-06	1.76e-05	2.70e-02	1.23e-04	3.02e-04	1.78e-03	1.34e-03	]
G [	4.01e-03	3.26e-04	-9.53e-06	2.99e-02	-2.67e-06	8.76e-06	6.72e-05	8.56e-03	1.65e-03	3.17e-04	]
T [	-4.71e-04	1.80e-03	1.54e-02	1.28e-05	1.33e-04	1.80e-04	-5.26e-06	-2.31e-04	-4.02e-04	3.12e-03	]

Frequency matrix

A [	50507	44039	16609	7	139500	803	125017	31710	46148	40126	]
C [	30306	48465	4459	1	5333	163597	8998	23180	39862	33368	]
G [	47275	38002	7009	165607	3168	189	9124	73362	43718	31385	]
T [	37528	35110	137540	1	17615	1027	22477	37365	35887	60737	]

Alternative motif patterns (AMPs)

AMP ID: MO000161.1

Best match: MA1640.1

CWM

A [	9.08e-03	3.95e-04	5.47e-04	6.31e-02	-4.60e-04	4.79e-04	2.68e-04	6.18e-02	-2.91e-04	-5.05e-04	3.71e-03	-1.26e-03	]
C [	-9.54e-04	-5.08e-05	2.90e-06	1.24e-06	1.99e-04	-9.11e-05	-2.79e-04	1.12e-05	1.59e-03	4.43e-04	-6.44e-04	9.45e-03	]
G [	1.56e-03	-6.81e-04	4.69e-02	-6.09e-06	-6.05e-05	-1.17e-04	1.62e-03	2.35e-05	-3.32e-04	1.36e-02	7.80e-03	9.17e-04	]
T [	-7.88e-04	2.76e-02	-3.54e-04	-2.04e-05	3.35e-02	2.88e-02	1.24e-02	-5.70e-07	2.98e-02	-4.13e-04	-9.34e-04	-2.00e-05	]

PFM

A [	20749	9280	5400	46709	3270	5416	9729	46427	1326	8079	14449	7367	]
C [	5279	701	365	35	1596	616	2368	16	5606	3342	3718	17639	]
G [	11219	1963	38929	130	3270	4552	9424	597	2250	23151	19296	10513	]
T [	9795	35099	2348	168	38906	36459	25522	2	37860	12471	9579	11524	]

AMP ID: MO000162.1

Best match: MA1640.1

CWM

A [	-3.24e-04	5.65e-03	-8.49e-06	1.88e-04	1.58e-02	1.67e-04	3.06e-05	-2.96e-05	2.29e-02	-1.06e-04	]
C [	5.25e-04	3.14e-04	3.70e-05	1.33e-04	2.75e-05	2.54e-04	5.35e-06	2.17e-02	-8.00e-05	9.72e-04	]
G [	4.37e-03	7.75e-04	1.43e-05	1.44e-02	5.96e-06	1.08e-02	0.00e+00	5.14e-05	9.71e-08	1.42e-04	]
T [	-4.36e-04	-3.12e-04	1.95e-02	-1.78e-04	1.20e-04	9.38e-06	2.29e-02	1.23e-05	-6.43e-06	5.61e-03	]

PFM

A [	4469	7547	142	1652	17252	2326	75	256	18323	1335	]
C [	4202	5181	251	1405	550	2570	6	17598	1	5256	]
G [	5809	4150	44	13231	61	12397	18	177	21	3592	]
T [	3877	1479	17920	2070	494	1064	18258	326	12	8174	]

AMP ID: MO000163.1

Best match: MA1640.1

CWM

A [	-2.87e-04	7.13e-05	5.06e-03	-1.77e-04	8.59e-06	3.29e-02	-7.20e-04	3.68e-03	-1.05e-04	2.94e-02	-5.45e-04	8.72e-04	7.76e-04	3.84e-03	]
C [	4.19e-04	3.06e-05	-2.78e-04	4.41e-05	0.00e+00	8.60e-06	1.74e-03	-3.32e-05	4.90e-05	4.96e-05	1.30e-03	7.11e-07	-1.75e-04	1.20e-03	]
G [	4.05e-04	1.80e-02	-5.65e-05	-4.10e-05	3.61e-02	0.00e+00	8.22e-04	-3.12e-04	1.89e-02	5.56e-05	-3.53e-04	3.46e-03	3.32e-03	1.76e-03	]
T [	6.34e-03	-1.24e-04	5.44e-06	2.21e-02	-5.26e-06	4.21e-07	4.34e-03	9.71e-03	1.40e-04	-4.50e-05	1.44e-02	1.67e-03	7.18e-04	-3.63e-04	]

PFM

A [	4206	2626	7432	708	16	17006	3173	6055	2566	15988	1164	3713	4633	4632	]
C [	2588	1318	3213	83	1	5	3683	159	610	294	2278	1128	2035	4300	]
G [	2871	11143	2315	117	17010	2	3121	3109	12088	674	1251	7581	6222	4786	]
T [	7368	1948	4074	16126	7	21	7057	7711	1770	78	12340	4612	4144	3316	]