Summary information of deep learning profile DL0112.1

This page shows the summary of all deep learning-derived profiles and motifs for NR2C2. Please scroll down the page to browse individual datasets.

Profile summary

Name: NR2C2
Profile ID: DL0112.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49116  
Source: ENCODE
Number of Datasets: 5
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -7.30e-07 7.40e-05 3.36e-02 3.13e-05 -5.83e-06 -4.29e-06 -7.09e-05 1.53e-04 3.96e-04 ]
C [ 3.48e-04 -8.23e-06 4.71e-06 3.16e-02 3.10e-02 5.93e-03 3.52e-03 -2.83e-04 5.29e-04 ]
G [ 1.78e-05 3.11e-02 -1.98e-06 -9.02e-08 2.79e-05 3.62e-05 4.54e-04 1.83e-03 5.47e-03 ]
T [ 3.08e-02 2.20e-05 3.18e-05 7.87e-07 -1.16e-05 1.48e-02 5.11e-03 6.71e-03 -1.21e-04 ]

Frequency matrix

A [ 295 11829 132924 9750 6040 4026 17818 31505 30148 ]
C [ 7819 4047 4011 129522 121196 49850 58057 25718 32438 ]
G [ 507 123318 3256 256 3183 3674 19402 36502 50064 ]
T [ 131988 1415 418 1080 10190 83059 45333 46885 27959 ]

Alternative motif patterns (AMPs)

AMP ID: MO000190.1

Best match: MA0504.1

A [ 1.17e-02 -4.94e-04 -3.70e-04 -3.74e-04 -1.36e-04 3.95e-02 1.50e-02 2.54e-02 -2.01e-04 -2.99e-04 -2.97e-04 -1.73e-04 2.29e-02 ]
C [ 1.62e-04 1.41e-04 -1.53e-04 -2.13e-05 3.35e-02 1.77e-05 -3.23e-04 1.22e-04 6.23e-05 -3.18e-05 -1.39e-05 2.73e-02 -1.73e-04 ]
G [ 6.92e-03 3.48e-02 3.19e-02 1.85e-04 -5.84e-04 7.19e-04 2.61e-03 6.51e-04 4.18e-02 2.90e-02 6.67e-04 -5.33e-04 1.99e-03 ]
T [ -3.53e-04 -3.40e-04 1.21e-03 3.42e-02 1.35e-04 -3.38e-05 -2.04e-04 -6.85e-05 -8.11e-05 2.69e-03 2.76e-02 3.30e-04 -5.30e-04 ]
A [ 15248 2190 2885 2228 638 29083 19494 26070 518 1395 1350 1568 21687 ]
C [ 1135 569 1253 4365 24404 229 1148 456 252 719 5966 21558 2042 ]
G [ 12397 26264 20842 5921 2466 1074 8682 3560 29448 19582 6718 2749 4509 ]
T [ 1733 1490 5533 18000 3005 127 1189 428 295 8817 16479 4637 2275 ]

AMP ID: MO000191.1

Best match: MA1536.1

A [ 3.46e-03 -3.55e-04 -5.56e-04 -2.83e-04 -3.71e-04 1.48e-02 6.00e-03 1.96e-02 0.00e+00 -5.27e-05 0.00e+00 0.00e+00 1.94e-02 ]
C [ 9.85e-05 6.74e-05 -6.32e-05 7.36e-04 5.72e-03 -1.01e-05 -2.86e-05 0.00e+00 0.00e+00 0.00e+00 0.00e+00 2.43e-02 0.00e+00 ]
G [ 2.20e-03 1.04e-02 9.15e-03 2.68e-05 4.26e-04 1.91e-04 1.54e-03 3.82e-04 3.01e-02 0.00e+00 9.75e-06 0.00e+00 9.67e-05 ]
T [ -5.16e-04 -3.10e-04 2.75e-04 4.36e-03 -4.09e-05 -3.57e-05 -6.40e-05 0.00e+00 0.00e+00 6.35e-03 2.46e-02 1.75e-06 0.00e+00 ]
A [ 2564 1550 1756 1354 1424 4818 3766 7097 3 509 8 9 7012 ]
C [ 1341 1259 1216 2032 2782 531 547 15 4 97 49 7085 108 ]
G [ 2208 3079 2690 1848 1782 1245 2741 388 7502 648 408 145 376 ]
T [ 1398 1623 1849 2277 1523 917 457 11 2 6257 7046 272 15 ]

5 models found for NR2C2

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000260.1 NR2C2 ENCSR000EVS HepG2 Homo sapiens
BP000295.1 NR2C2 ENCSR559ZKI HepG2 Homo sapiens
BP000407.1 NR2C2 ENCSR454GVT WTC11 Homo sapiens
BP000895.1 NR2C2 ENCSR516SWI K562 Homo sapiens
BP001251.1 NR2C2 ENCSR750LYM K562 Homo sapiens
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