Summary information of deep learning profile DL0115.1

This page shows the summary of all deep learning-derived profiles and motifs for NR3C1. Please scroll down the page to browse individual datasets.

Profile summary

Name: NR3C1
Profile ID: DL0115.1
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCODE
Number of Datasets: 19
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ 4.93e-03 -7.47e-04 3.32e-03 4.20e-02 -1.18e-05 1.67e-02 -8.82e-04 2.94e-03 5.29e-03 -5.93e-04 1.69e-05 -8.61e-05 1.88e-03 2.71e-06 -1.21e-03 ]
C [ -5.64e-05 -2.52e-04 -1.25e-03 -4.63e-04 6.86e-02 -1.29e-03 9.97e-04 -8.31e-04 6.50e-04 1.51e-03 -2.40e-06 -4.17e-05 -6.47e-04 5.57e-02 5.08e-03 ]
G [ 5.58e-03 3.57e-02 -4.53e-04 -3.99e-04 -1.12e-04 2.29e-03 3.15e-03 -7.92e-04 1.08e-03 -1.69e-04 8.00e-02 -2.52e-05 -1.18e-03 -2.77e-06 -8.81e-05 ]
T [ -1.71e-03 -4.10e-04 1.10e-03 -5.87e-04 1.33e-05 -2.05e-03 1.98e-03 2.02e-03 -6.84e-04 2.70e-02 1.64e-06 5.37e-02 5.68e-03 2.17e-06 7.83e-03 ]

Frequency matrix

A [ 193957 104459 169594 339267 4259 293368 89218 147804 152352 73489 205 18284 116949 13642 87754 ]
C [ 43494 23675 91989 38055 467286 40778 124982 95859 133648 26603 47 5164 101392 459359 158874 ]
G [ 158833 271954 117203 46213 11563 38984 148829 97847 120384 9822 493629 2035 64287 982 10359 ]
T [ 97628 93825 115128 70378 10805 120783 130884 152403 87529 383998 32 468430 211285 19930 236926 ]

Alternative motif patterns (AMPs)

AMP ID: MO000199.1

Best match: MA0113.4

A [ -3.19e-04 1.91e-03 1.24e-02 -3.62e-04 2.48e-03 -3.15e-04 8.24e-03 1.31e-02 -3.40e-05 1.16e-05 8.60e-06 8.81e-04 -2.03e-05 -3.70e-04 ]
C [ 1.20e-04 6.63e-04 3.36e-04 4.03e-03 -2.22e-05 8.83e-04 1.10e-05 2.39e-04 4.84e-04 2.97e-07 9.36e-06 9.75e-05 3.10e-02 3.95e-03 ]
G [ 1.77e-02 3.00e-04 1.73e-04 -2.04e-03 9.03e-03 8.60e-03 -2.31e-04 2.17e-04 -6.07e-06 4.42e-02 0.00e+00 -5.69e-04 -1.72e-06 1.64e-04 ]
T [ 1.23e-04 3.01e-04 -5.04e-04 -1.33e-03 -3.05e-04 5.46e-04 6.28e-04 9.72e-05 2.03e-02 -3.07e-06 3.27e-02 5.21e-03 1.60e-04 4.12e-03 ]
A [ 25085 39989 54290 26477 38389 28080 50662 58713 5615 1 599 31045 1250 18971 ]
C [ 18635 27919 23548 31874 18391 29433 18609 21173 3757 0 184 19094 121439 38970 ]
G [ 57468 29024 21079 31141 39580 42795 16015 20605 244 125566 49 8831 361 2415 ]
T [ 24379 28635 26650 36075 29207 25259 40281 25077 115951 0 124735 66598 2517 65211 ]

19 models found for NR3C1

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 9 profiles of page 2 from 2 pages