Summary information of deep learning profile DL0127.1

This page shows the summary of all deep learning-derived profiles and motifs for PBX3. Please scroll down the page to browse individual datasets.

Profile summary

Name: PBX3
Profile ID: DL0127.1
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P40426  
Source: ENCODE
Number of Datasets: 3
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -4.09e-04 3.04e-05 4.86e-02 -4.45e-04 -1.73e-04 6.61e-07 3.17e-02 -4.03e-05 1.95e-02 -3.33e-04 ]
C [ 3.15e-04 1.24e-04 2.16e-05 1.98e-03 3.62e-05 1.93e-05 -6.29e-06 4.14e-02 -2.59e-05 2.24e-05 ]
G [ -4.47e-04 3.56e-02 4.12e-05 6.05e-04 -2.71e-04 4.86e-02 3.05e-03 -9.35e-06 2.23e-03 1.38e-02 ]
T [ 2.12e-02 -4.18e-05 -2.14e-05 8.75e-03 2.94e-02 -9.13e-06 1.39e-05 4.27e-05 -1.39e-04 -1.14e-04 ]

Frequency matrix

A [ 5202 2433 24161 3209 1949 216 20699 351 20792 3260 ]
C [ 1670 1345 978 7331 782 192 423 26551 395 4326 ]
G [ 2760 22658 1001 8865 1883 26892 5503 121 3481 15584 ]
T [ 17776 973 1270 8004 22795 109 784 386 2741 4239 ]

3 models found for PBX3

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000227.1 PBX3 ENCSR865HXK HEK293 Homo sapiens
BP000721.1 PBX3 ENCSR000BGR GM12878 Homo sapiens
BP001116.1 PBX3 ENCSR000BVE SK-N-SH Homo sapiens
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