Summary information of deep learning profile DL0127.1

This page shows the summary of all deep learning-derived profiles and motifs for PBX3. Please scroll down the page to browse individual datasets.

Profile summary

Name: PBX3
Profile ID: DL0127.1
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P40426  
Source: ENCODE
Number of Datasets: 3
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -1.14e-04 -1.39e-04 4.27e-05 1.39e-05 -9.13e-06 2.94e-02 8.75e-03 -2.14e-05 -4.18e-05 2.12e-02 ]
C [ 1.38e-02 2.23e-03 -9.35e-06 3.05e-03 4.86e-02 -2.71e-04 6.05e-04 4.12e-05 3.56e-02 -4.47e-04 ]
G [ 2.24e-05 -2.59e-05 4.14e-02 -6.29e-06 1.93e-05 3.62e-05 1.98e-03 2.16e-05 1.24e-04 3.15e-04 ]
T [ -3.33e-04 1.95e-02 -4.03e-05 3.17e-02 6.61e-07 -1.73e-04 -4.45e-04 4.86e-02 3.04e-05 -4.09e-04 ]

Frequency matrix

A [ 4239 2741 386 784 109 22795 8004 1270 973 17776 ]
C [ 15584 3481 121 5503 26892 1883 8865 1001 22658 2760 ]
G [ 4326 395 26551 423 192 782 7331 978 1345 1670 ]
T [ 3260 20792 351 20699 216 1949 3209 24161 2433 5202 ]

3 models found for PBX3

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000227.1 PBX3 ENCSR865HXK HEK293 Homo sapiens
BP000721.1 PBX3 ENCSR000BGR GM12878 Homo sapiens
BP001116.1 PBX3 ENCSR000BVE SK-N-SH Homo sapiens
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