Summary information of deep learning profile DL0133.1

This page shows the summary of all deep learning-derived profiles and motifs for PRDM4. Please scroll down the page to browse individual datasets.

Profile summary

Name: PRDM4
Profile ID: DL0133.1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9UKN5  
Source: ENCODE
Number of Datasets: 1
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -6.59e-04 -8.67e-04 -8.61e-04 -3.24e-04 -3.30e-04 2.94e-03 1.63e-04 -4.08e-04 3.76e-03 1.07e-03 6.32e-02 5.34e-02 6.91e-02 3.72e-05 -1.18e-03 -2.09e-04 -4.85e-04 -8.08e-04 ]
C [ 6.65e-05 -1.98e-05 -1.45e-04 -2.27e-05 1.10e-03 2.51e-03 1.43e-02 -9.35e-04 -1.34e-04 -1.18e-06 -5.85e-06 -1.52e-04 -2.10e-05 6.63e-02 2.26e-03 -1.04e-04 9.61e-03 1.43e-02 ]
G [ 1.43e-02 1.25e-02 8.24e-03 3.08e-03 1.64e-03 -5.44e-04 -7.03e-04 -5.15e-04 -2.40e-03 5.11e-02 -3.09e-05 -1.15e-04 -6.10e-05 -1.95e-05 -1.26e-04 1.55e-02 -5.46e-04 -4.07e-04 ]
T [ -9.85e-04 -7.06e-04 -5.69e-04 1.54e-04 -1.45e-04 -4.63e-06 5.07e-05 1.94e-02 7.87e-03 1.45e-05 3.58e-05 -2.62e-05 0.00e+00 -1.04e-05 3.58e-03 -1.03e-03 3.61e-03 5.09e-03 ]

Frequency matrix

A [ 6341 6437 7112 7090 7458 10257 8004 6255 11470 3847 27527 26539 27589 535 8261 5564 5762 4227 ]
C [ 5343 5116 5242 5973 7615 7540 10790 5128 2057 261 56 438 34 27251 6698 5908 10932 12821 ]
G [ 10312 10211 9531 8568 6413 3869 3784 4059 4972 22934 72 864 269 56 1817 12974 2246 1612 ]
T [ 5902 6134 6012 6266 6413 6232 5320 12456 9399 856 243 57 6 56 11122 3451 8957 9238 ]

1 models found for PRDM4

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000122.1 PRDM4 ENCSR443MVV HEK293 Homo sapiens
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