Summary information of deep learning profile DL0135.1

This page shows the summary of all deep learning-derived profiles and motifs for REST. Please scroll down the page to browse individual datasets.

Profile summary

Name: REST
Profile ID: DL0135.1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCODE
Number of Datasets: 29
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ 2.01e-02 4.48e-04 -2.26e-04 1.72e-03 -1.13e-03 -3.28e-05 7.25e-05 8.95e-02 -5.14e-05 1.02e-01 -8.03e-06 -1.61e-03 7.77e-04 8.84e-05 -6.27e-04 ]
C [ 4.15e-03 2.70e-02 1.55e-02 1.72e-02 2.30e-03 6.32e-05 4.28e-05 2.53e-04 8.39e-02 2.15e-04 5.13e-05 5.44e-02 -2.19e-04 3.64e-02 4.16e-02 ]
G [ 5.59e-03 -4.62e-05 1.91e-02 1.19e-03 -5.50e-04 1.26e-01 1.24e-01 4.45e-05 2.75e-04 5.58e-05 1.28e-01 -5.38e-04 1.67e-02 1.61e-03 -2.34e-04 ]
T [ -1.31e-03 3.27e-03 -1.04e-03 1.05e-03 4.07e-02 -3.85e-06 1.70e-04 1.36e-04 -4.96e-05 -1.34e-05 6.55e-05 1.45e-05 1.28e-02 -9.05e-04 1.75e-04 ]

Frequency matrix

A [ 87268 30170 30166 44778 22874 2077 3679 170187 7445 180393 2221 23389 48308 30363 24732 ]
C [ 34874 91947 77171 65637 20728 478 232 8894 156200 1620 589 125869 7676 101609 117061 ]
G [ 41284 29845 51619 30625 17875 184045 182510 1783 16827 1045 183525 12208 64626 39890 11610 ]
T [ 23719 35183 28189 46106 125668 545 724 6281 6673 4087 810 25679 66535 15283 33742 ]

Alternative motif patterns (AMPs)

AMP ID: MO000229.1

Best match: MA0138.2

A [ -1.48e-03 -8.91e-04 9.92e-02 -6.96e-04 -5.42e-03 1.92e-01 -1.74e-05 -1.29e-03 2.08e-02 -9.48e-03 -8.77e-04 -4.48e-04 1.08e-01 -9.12e-04 1.49e-01 -3.56e-04 -6.89e-03 ]
C [ 2.08e-03 1.10e-01 1.43e-04 4.49e-04 3.88e-02 1.29e-04 2.19e-01 1.23e-01 -1.60e-03 9.02e-03 1.27e-04 9.76e-05 -8.62e-04 9.97e-02 2.44e-04 -1.11e-04 5.75e-02 ]
G [ -1.60e-04 -5.37e-04 1.28e-03 1.74e-01 5.40e-03 1.17e-04 6.18e-05 4.51e-05 -2.23e-04 -3.51e-03 1.97e-01 2.22e-01 -2.87e-04 2.33e-03 1.02e-04 1.79e-01 -1.95e-03 ]
T [ 6.61e-02 -6.62e-04 -3.38e-04 -5.73e-04 2.09e-03 4.97e-06 7.06e-06 -5.10e-05 -2.70e-03 3.29e-02 -1.23e-04 2.68e-05 -1.24e-03 -3.10e-04 -1.77e-05 -2.27e-04 -2.69e-03 ]
A [ 4748 6108 66756 2502 6372 76179 80 1820 40748 14507 1895 1386 65797 1363 74815 3355 12359 ]
C [ 15405 59094 1665 2794 41001 110 76409 70264 9510 12951 256 216 6289 59092 584 675 40429 ]
G [ 9156 3986 6486 69721 17768 149 50 558 6103 6431 74171 74773 1496 11694 566 71878 10025 ]
T [ 47270 7391 1672 1562 11438 141 40 3937 20218 42690 257 204 2997 4430 614 671 13766 ]

29 models found for REST

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
Showing 10 profiles of page 2 from 3 pages