Summary information of deep learning profile DL0135.1

This page shows the summary of all deep learning-derived profiles and motifs for REST. Please scroll down the page to browse individual datasets.

Profile summary

Name: REST
Profile ID: DL0135.1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCODE
Number of Datasets: 29
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ 2.01e-02 4.48e-04 -2.26e-04 1.72e-03 -1.13e-03 -3.28e-05 7.25e-05 8.95e-02 -5.14e-05 1.02e-01 -8.03e-06 -1.61e-03 7.77e-04 8.84e-05 -6.27e-04 ]
C [ 4.15e-03 2.70e-02 1.55e-02 1.72e-02 2.30e-03 6.32e-05 4.28e-05 2.53e-04 8.39e-02 2.15e-04 5.13e-05 5.44e-02 -2.19e-04 3.64e-02 4.16e-02 ]
G [ 5.59e-03 -4.62e-05 1.91e-02 1.19e-03 -5.50e-04 1.26e-01 1.24e-01 4.45e-05 2.75e-04 5.58e-05 1.28e-01 -5.38e-04 1.67e-02 1.61e-03 -2.34e-04 ]
T [ -1.31e-03 3.27e-03 -1.04e-03 1.05e-03 4.07e-02 -3.85e-06 1.70e-04 1.36e-04 -4.96e-05 -1.34e-05 6.55e-05 1.45e-05 1.28e-02 -9.05e-04 1.75e-04 ]

Frequency matrix

A [ 87268 30170 30166 44778 22874 2077 3679 170187 7445 180393 2221 23389 48308 30363 24732 ]
C [ 34874 91947 77171 65637 20728 478 232 8894 156200 1620 589 125869 7676 101609 117061 ]
G [ 41284 29845 51619 30625 17875 184045 182510 1783 16827 1045 183525 12208 64626 39890 11610 ]
T [ 23719 35183 28189 46106 125668 545 724 6281 6673 4087 810 25679 66535 15283 33742 ]

Alternative motif patterns (AMPs)

AMP ID: MO000229.1

Best match: MA0138.2

A [ -1.48e-03 -8.91e-04 9.92e-02 -6.96e-04 -5.42e-03 1.92e-01 -1.74e-05 -1.29e-03 2.08e-02 -9.48e-03 -8.77e-04 -4.48e-04 1.08e-01 -9.12e-04 1.49e-01 -3.56e-04 -6.89e-03 ]
C [ 2.08e-03 1.10e-01 1.43e-04 4.49e-04 3.88e-02 1.29e-04 2.19e-01 1.23e-01 -1.60e-03 9.02e-03 1.27e-04 9.76e-05 -8.62e-04 9.97e-02 2.44e-04 -1.11e-04 5.75e-02 ]
G [ -1.60e-04 -5.37e-04 1.28e-03 1.74e-01 5.40e-03 1.17e-04 6.18e-05 4.51e-05 -2.23e-04 -3.51e-03 1.97e-01 2.22e-01 -2.87e-04 2.33e-03 1.02e-04 1.79e-01 -1.95e-03 ]
T [ 6.61e-02 -6.62e-04 -3.38e-04 -5.73e-04 2.09e-03 4.97e-06 7.06e-06 -5.10e-05 -2.70e-03 3.29e-02 -1.23e-04 2.68e-05 -1.24e-03 -3.10e-04 -1.77e-05 -2.27e-04 -2.69e-03 ]
A [ 4748 6108 66756 2502 6372 76179 80 1820 40748 14507 1895 1386 65797 1363 74815 3355 12359 ]
C [ 15405 59094 1665 2794 41001 110 76409 70264 9510 12951 256 216 6289 59092 584 675 40429 ]
G [ 9156 3986 6486 69721 17768 149 50 558 6103 6431 74171 74773 1496 11694 566 71878 10025 ]
T [ 47270 7391 1672 1562 11438 141 40 3937 20218 42690 257 204 2997 4430 614 671 13766 ]

29 models found for REST

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000383.1 REST ENCSR867WPH liver Homo sapiens
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 9 profiles of page 3 from 3 pages