Summary information of deep learning profile DL0147.1

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This page shows the summary of all deep learning-derived profiles and motifs for SPDEF. Please scroll down the page to browse individual datasets.

Profile summary

Name: SPDEF
Profile ID: DL0147.1
Class: Tryptophan cluster factors
Family: Ets-related
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561   O95238   P19419   Q3KNT2  
Source: ENCODE
Number of Datasets: 1
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

 
A [ 8.96e-03 1.74e-03 -3.78e-05 3.44e-03 1.19e-06 0.00e+00 3.10e-02 1.51e-03 6.34e-05 -1.37e-04 ]
C [ -2.46e-04 2.98e-03 2.57e-02 1.99e-02 0.00e+00 2.36e-06 0.00e+00 -5.45e-05 1.77e-03 3.06e-03 ]
G [ -2.66e-05 -1.98e-05 1.21e-04 -9.75e-07 4.35e-02 4.23e-02 7.76e-06 -1.02e-04 4.65e-03 -3.70e-05 ]
T [ 2.15e-03 2.67e-04 -2.82e-06 2.71e-06 2.77e-06 9.93e-07 6.48e-06 1.56e-02 -1.25e-04 1.11e-02 ]

Frequency matrix

       
A [ 13288 6206 1665 12035 43 5 26967 12276 5648 2654 ]
C [ 3584 12367 26538 18247 1 12 1665 3603 8230 9438 ]
G [ 6218 8777 2652 157 31066 31131 1136 2076 11554 4084 ]
T [ 8062 3801 297 713 42 4 1384 13196 5720 14975 ]

1 models found for SPDEF

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000841.1 SPDEF ENCSR042GSX MCF-7 Homo sapiens
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