Summary information of deep learning profile DL0172.1

This page shows the summary of all deep learning-derived profiles and motifs for YY1. Please scroll down the page to browse individual datasets.

Profile summary

Name: YY1
Profile ID: DL0172.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P25490  
Source: ENCODE
Number of Datasets: 18
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ 3.04e-02 2.39e-02 6.35e-03 9.67e-02 -2.95e-06 -3.06e-06 -1.60e-05 -5.69e-04 -1.69e-03 -1.37e-03 -7.69e-04 ]
C [ -2.08e-04 1.02e-03 2.76e-04 5.56e-06 1.91e-05 2.84e-06 -6.85e-07 6.10e-02 2.35e-03 1.78e-04 2.38e-02 ]
G [ 2.58e-03 -6.76e-04 2.15e-04 1.33e-05 -3.11e-07 8.03e-02 6.96e-02 -9.21e-05 2.17e-02 2.46e-02 -7.04e-04 ]
T [ -3.15e-04 1.01e-03 -3.19e-04 1.27e-06 9.64e-02 3.15e-06 -8.61e-05 -4.04e-04 -1.91e-03 -8.27e-04 -7.30e-04 ]

Frequency matrix

A [ 240062 238643 198072 440567 275 1488 5901 70213 54310 53344 81753 ]
C [ 46248 83840 111004 293 240 1671 3985 320490 84169 74560 234778 ]
G [ 114605 47778 100509 549 335 436521 415976 12174 193718 248032 62186 ]
T [ 41443 72098 32775 950 441509 2679 16498 39482 110162 66423 63641 ]

Alternative motif patterns (AMPs)

AMP ID: MO000278.1

Best match: MA0095.2

A [ 4.32e-05 -3.06e-04 -8.08e-05 9.05e-05 3.21e-02 0.00e+00 8.24e-04 0.00e+00 0.00e+00 8.50e-05 4.37e-03 2.63e-04 2.47e-04 4.55e-04 ]
C [ 4.93e-03 -4.25e-04 2.15e-02 2.71e-02 1.74e-04 0.00e+00 -1.61e-04 0.00e+00 0.00e+00 0.00e+00 -2.21e-04 4.39e-03 4.91e-04 1.22e-03 ]
G [ 5.34e-03 1.33e-02 -2.26e-05 0.00e+00 1.34e-05 0.00e+00 1.30e-02 0.00e+00 0.00e+00 2.03e-03 7.99e-03 -7.42e-05 0.00e+00 -2.11e-04 ]
T [ -1.02e-03 6.41e-04 1.32e-03 4.80e-04 -3.30e-05 3.87e-02 4.02e-03 3.04e-02 3.79e-02 1.67e-02 3.07e-03 5.81e-03 9.39e-03 6.86e-03 ]
A [ 1518 1056 598 55 6430 57 784 25 3 759 1597 1717 1615 1763 ]
C [ 2160 618 5618 6418 64 11 1104 7 15 352 1043 1622 1595 1528 ]
G [ 1393 2614 102 12 3 15 1451 13 4 1878 1746 1109 919 1126 ]
T [ 1453 2236 206 39 27 6441 3185 6479 6502 3536 2138 2075 2395 2107 ]

18 models found for YY1

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000031.1 YY1 ENCSR000BSM SK-N-SH Homo sapiens
BP000033.1 YY1 ENCSR000BSY Ishikawa Homo sapiens
BP000047.1 YY1 ENCSR000EUM GM12878 Homo sapiens
BP000051.1 YY1 ENCSR000EWF K562 Homo sapiens
BP000054.1 YY1 ENCSR000EXG NT2/D1 Homo sapiens
BP000112.1 YY1 ENCSR382MOM liver Homo sapiens
BP000176.1 YY1 ENCSR859RAO HEK293 Homo sapiens
BP000190.1 YY1 ENCSR994YLZ liver Homo sapiens
Showing 8 profiles of page 2 from 2 pages