Summary information of deep learning profile DL0172.1

This page shows the summary of all deep learning-derived profiles and motifs for YY1. Please scroll down the page to browse individual datasets.

Profile summary

Name: YY1
Profile ID: DL0172.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P25490  
Source: ENCODE
Number of Datasets: 18
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -7.30e-04 -8.27e-04 -1.91e-03 -4.04e-04 -8.61e-05 3.15e-06 9.64e-02 1.27e-06 -3.19e-04 1.01e-03 -3.15e-04 ]
C [ -7.04e-04 2.46e-02 2.17e-02 -9.21e-05 6.96e-02 8.03e-02 -3.11e-07 1.33e-05 2.15e-04 -6.76e-04 2.58e-03 ]
G [ 2.38e-02 1.78e-04 2.35e-03 6.10e-02 -6.85e-07 2.84e-06 1.91e-05 5.56e-06 2.76e-04 1.02e-03 -2.08e-04 ]
T [ -7.69e-04 -1.37e-03 -1.69e-03 -5.69e-04 -1.60e-05 -3.06e-06 -2.95e-06 9.67e-02 6.35e-03 2.39e-02 3.04e-02 ]

Frequency matrix

A [ 63641 66423 110162 39482 16498 2679 441509 950 32775 72098 41443 ]
C [ 62186 248032 193718 12174 415976 436521 335 549 100509 47778 114605 ]
G [ 234778 74560 84169 320490 3985 1671 240 293 111004 83840 46248 ]
T [ 81753 53344 54310 70213 5901 1488 275 440567 198072 238643 240062 ]

Alternative motif patterns (AMPs)

AMP ID: MO000278.1

Best match: MA0095.2

A [ 4.32e-05 -3.06e-04 -8.08e-05 9.05e-05 3.21e-02 0.00e+00 8.24e-04 0.00e+00 0.00e+00 8.50e-05 4.37e-03 2.63e-04 2.47e-04 4.55e-04 ]
C [ 4.93e-03 -4.25e-04 2.15e-02 2.71e-02 1.74e-04 0.00e+00 -1.61e-04 0.00e+00 0.00e+00 0.00e+00 -2.21e-04 4.39e-03 4.91e-04 1.22e-03 ]
G [ 5.34e-03 1.33e-02 -2.26e-05 0.00e+00 1.34e-05 0.00e+00 1.30e-02 0.00e+00 0.00e+00 2.03e-03 7.99e-03 -7.42e-05 0.00e+00 -2.11e-04 ]
T [ -1.02e-03 6.41e-04 1.32e-03 4.80e-04 -3.30e-05 3.87e-02 4.02e-03 3.04e-02 3.79e-02 1.67e-02 3.07e-03 5.81e-03 9.39e-03 6.86e-03 ]
A [ 1518 1056 598 55 6430 57 784 25 3 759 1597 1717 1615 1763 ]
C [ 2160 618 5618 6418 64 11 1104 7 15 352 1043 1622 1595 1528 ]
G [ 1393 2614 102 12 3 15 1451 13 4 1878 1746 1109 919 1126 ]
T [ 1453 2236 206 39 27 6441 3185 6479 6502 3536 2138 2075 2395 2107 ]

18 models found for YY1

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000009.1 YY1 ENCSR000BKD H1 Homo sapiens
BP000011.1 YY1 ENCSR000BKJ GM12891 Homo sapiens
BP000013.1 YY1 ENCSR000BKU K562 Homo sapiens
BP000014.1 YY1 ENCSR000BLT GM12892 Homo sapiens
BP000015.1 YY1 ENCSR000BLZ SK-N-SH Homo sapiens
BP000016.1 YY1 ENCSR000BMH K562 Homo sapiens
BP000020.1 YY1 ENCSR000BNP GM12878 Homo sapiens
BP000021.1 YY1 ENCSR000BNT HepG2 Homo sapiens
BP000022.1 YY1 ENCSR000BNX HCT116 Homo sapiens
BP000028.1 YY1 ENCSR000BPM A549 Homo sapiens
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