JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1436.2 nuc-1 Neurospora crassa Basic helix-loop-helix factors (bHLH)
MA1437.1 wc-1 Neurospora crassa Other C4 zinc finger-type factors C4-GATA-related
MA1437.2 wc-1 Neurospora crassa Other C4 zinc finger-type factors C4-GATA-related
MA1438.1 atf-7 Caenorhabditis briggsae Basic leucine zipper factors (bZIP) Jun-related
MA1438.2 atf-7 Caenorhabditis briggsae Basic leucine zipper factors (bZIP) Jun-related
MA1439.1 elt-6 Caenorhabditis briggsae Other C4 zinc finger-type factors C4-GATA-related
MA1439.2 elt-6 Caenorhabditis briggsae Other C4 zinc finger-type factors C4-GATA-related
MA1440.1 fkh-9 Caenorhabditis briggsae Fork head/winged helix factors FOX
MA1441.1 lim-7 Caenorhabditis briggsae Homeo domain factors
MA1441.2 lim-7 Caenorhabditis briggsae Homeo domain factors HD-LIM
Showing 10 profiles of page 278 from 428 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.