JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1755.2 GATA4 Arabidopsis thaliana Other C4 zinc finger-type factors C4-GATA-related
MA1756.1 GRF9 Arabidopsis thaliana CH3 GRF
MA1756.2 GRF9 Arabidopsis thaliana C3H zinc finger factors GRF
MA1757.1 HDG7 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1757.2 HDG7 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1758.1 HSFA1E Arabidopsis thaliana Heat shock factors
MA1758.2 HSFA1E Arabidopsis thaliana Heat shock factors HSF
MA1759.1 HSFA4A Arabidopsis thaliana Heat shock factors
MA1759.2 HSFA4A Arabidopsis thaliana Heat shock factors HSF
MA1760.1 HSFA6A Arabidopsis thaliana Heat shock factors HSF
Showing 10 profiles of page 333 from 428 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.