JASPAR CORE

  1. Home
  2. Collection CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2247.1 Kah Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2248.1 kay Drosophila melanogaster Basic leucine zipper factors (bZIP) Fos-related
MA2249.1 ken Drosophila melanogaster C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA2250.1 klu Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2251.1 knrl Drosophila melanogaster Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA2252.1 lmd Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2253.1 luna Drosophila melanogaster C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA2254.1 lz Drosophila melanogaster Runt domain factors Runt-related factors
MA2255.1 Max Drosophila melanogaster Basic helix-loop-helix factors (bHLH) bHLH-ZIP
MA2256.1 mid Drosophila melanogaster T-Box factors TBX1-related factors
Showing 10 profiles of page 408 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.