JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1035.1 TCP4 Arabidopsis thaliana TCP
MA1036.1 MYB111 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1037.1 MYB24 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1037.2 MYB24 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1038.1 MYB3 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1038.2 MYB3 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1039.1 MYB4 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1040.1 MYB46 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1041.1 MYB55 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1042.1 MYB59 Arabidopsis thaliana Tryptophan cluster factors Myb
Showing 10 profiles of page 203 from 428 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.