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Total 4279 profiles

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ID Name Species Class Family Sequence logo
MA1212.1 ATHB-13 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1212.2 ATHB-13 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1213.1 ATHB-21 Arabidopsis thaliana Homeo domain factors::Homeo domain factors HD-ZIP::PLINC
MA1213.2 ZHD3 Arabidopsis thaliana Homeo domain factors PLINC
MA1213.3 ZHD3 Arabidopsis thaliana Homeo domain factors PLINC
MA1214.1 ATHB-40 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1214.2 ATHB-40 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1215.1 ATHB-53 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1215.2 ATHB-53 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1218.1 DREB1D Arabidopsis thaliana AP2/EREBP ERF/DREB
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.