JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0292.1 ECM22 Saccharomyces cerevisiae C6 zinc cluster factors
MA0292.2 ECM22 Saccharomyces cerevisiae C6 zinc cluster factors
MA0293.1 ECM23 Saccharomyces cerevisiae Other C4 zinc finger-type factors C4-GATA-related
MA0293.2 ECM23 Saccharomyces cerevisiae Other C4 zinc finger-type factors C4-GATA-related
MA0294.1 EDS1 Saccharomyces cerevisiae C6 zinc cluster factors
MA0294.2 EDS1 Saccharomyces cerevisiae C6 zinc cluster factors
MA0295.1 FHL1 Saccharomyces cerevisiae Fork head/winged helix factors FOX
MA0295.2 FHL1 Saccharomyces cerevisiae Fork head/winged helix factors FOX
MA0296.1 FKH1 Saccharomyces cerevisiae Fork head/winged helix factors FOX
MA0296.2 FKH1 Saccharomyces cerevisiae Fork head/winged helix factors FOX
Showing 10 profiles of page 60 from 428 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.