Detailed information of matrix profile MA0007.1

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Profile summary
Name: Ar
Matrix ID: MA0007.1
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Collection: CORE
Taxon: Vertebrates
Species: Rattus rattus
Data Type: SELEX
Validation: 1491700
Uniprot ID: P15207  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 9 9 11 16 0 12 21 0 15 4 5 6 3 0 4 11 1 3 6 6 10 5 ]
C [ 7 2 3 1 0 6 2 24 0 9 11 9 5 0 0 5 22 16 7 5 11 11 ]
G [ 2 3 3 7 22 1 0 0 8 2 2 9 1 24 0 1 1 1 5 9 0 6 ]
T [ 6 10 7 0 2 5 1 0 1 9 6 0 15 0 20 7 0 4 6 4 3 2 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0007.1 MA0007 1 Ar Rattus rattus
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
MA0007.2 MA0007 2 AR Homo sapiens
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
MA0007.3 MA0007 3 Ar Mus musculus
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
MA0007.4 MA0007 4 Ar Mus musculus
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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