Detailed information of matrix profile MA0050.3

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Profile summary
Name: Irf1
Matrix ID: MA0050.3
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 21803131
Uniprot ID: P15314  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 8053 4511 3724 1661 13772 14795 14878 1939 1900 1017 14145 14424 14172 2660 3552 ]
C [ 2111 3931 1292 637 361 253 176 9822 933 314 298 353 365 5050 4087 ]
G [ 2199 3840 2035 12682 1024 258 240 3315 274 14013 775 499 607 5999 1922 ]
T [ 3277 3358 8589 660 483 334 346 564 12533 296 422 364 496 1931 6079 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0050.1 MA0050 1 IRF1 Homo sapiens
Interferon-regulatory factors Tryptophan cluster factors
MA0050.2 MA0050 2 IRF1 Homo sapiens
Interferon-regulatory factors Tryptophan cluster factors
MA0050.3 MA0050 3 Irf1 Mus musculus
Interferon-regulatory factors Tryptophan cluster factors
MA0050.4 MA0050 4 Irf1 Mus musculus
Interferon-regulatory factors Tryptophan cluster factors
     

-log(P-value) = 132.903

TFFM details

TFFM ID: TFFM0708.1

ChIP-seq Centrality
-log(P-value): 2249.17

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0708.1

ChIP-seq Centrality
-log(P-value): 2420.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

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GC Content: