Detailed information of matrix profile MA0074.1

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Profile summary
Name: RXRA::VDR
Matrix ID: MA0074.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)::Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SELEX
Validation: 8674817
Uniprot ID: P11473   P19793  
Source:
Comment: heterodimer between RXRA and VDR

Sequence logo

Frequency matrix

         
A [ 3 0 0 0 0 9 4 2 2 5 0 0 1 0 7 ]
C [ 0 0 0 0 9 0 2 4 0 0 0 0 0 9 1 ]
G [ 7 10 9 0 0 1 0 2 8 5 10 0 0 0 2 ]
T [ 0 0 1 10 1 0 4 2 0 0 0 10 9 1 0 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0074.1 MA0074 1 RXRA::VDR Homo sapiens
RXR-related receptors (NR2)::Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: -

Alias: -

Symbol: -

Consensus:

Included Models:

GC Content: