Detailed information of matrix profile MA0079.3

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Profile summary
Name: SP1
Matrix ID: MA0079.3
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 17916232
Uniprot ID: P08047  
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 857 0 99 0 0 1359 0 0 0 1054 652 ]
C [ 1786 6215 6703 8734 8661 0 8734 8734 6679 6357 4969 ]
G [ 4271 642 0 0 0 4624 0 0 0 0 734 ]
T [ 1820 1877 1932 0 73 2751 0 0 2055 1323 2379 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0079.1 MA0079 1 SP1 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0079.2 MA0079 2 SP1 Homo sapiens
Mus musculus
Rattus norvegicus
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0079.3 MA0079 3 SP1 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0079.4 MA0079 4 SP1 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0079.5 MA0079 5 SP1 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0097.1

ChIP-seq Centrality
-log(P-value): 712.651

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0097.1

ChIP-seq Centrality
-log(P-value): 720.642

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: