Detailed information of matrix profile MA0087.2

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Profile summary
Name: Sox5
Matrix ID: MA0087.2
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 1396566
Uniprot ID: P35710  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 31 53 27 104 122 0 120 114 6 20 13 22 37 ]
C [ 24 22 32 4 0 120 2 5 3 0 14 36 34 ]
G [ 48 34 48 12 1 2 2 4 1 101 90 40 26 ]
T [ 21 15 17 4 1 2 0 1 114 3 7 26 27 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0087.1 MA0087 1 Sox5 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
MA0087.2 MA0087 2 Sox5 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
MA0087.3 MA0087 3 Sox5 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
     

-log(P-value) = 6.33741

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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