Detailed information of matrix profile MA0088.1

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Profile summary
Name: znf143
Matrix ID: MA0088.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Xenopus laevis
Data Type: COMPILED
Validation: 9009278
Uniprot ID: Q91853  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 0 1 5 5 1 0 3 9 0 0 5 0 0 0 2 7 5 4 1 3 ]
C [ 1 7 0 1 0 0 6 1 2 2 4 0 0 0 0 0 2 1 1 4 ]
G [ 6 1 3 1 5 10 1 0 2 4 1 1 10 10 7 1 3 3 2 3 ]
T [ 3 1 2 3 4 0 0 0 6 4 0 9 0 0 1 2 0 2 6 0 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0088.1 MA0088 1 znf143 Xenopus laevis
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0088.2 MA0088 2 ZNF143 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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