Detailed information of matrix profile MA0114.1

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Profile summary
Name: HNF4A
Matrix ID: MA0114.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species:
Data Type: COMPILED
Validation: 12385991
Uniprot ID: P41235  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 28 2 12 5 3 59 53 56 4 6 3 4 42 ]
C [ 7 2 4 23 51 1 2 1 4 2 22 49 7 ]
G [ 27 56 35 20 4 3 10 8 58 33 11 5 10 ]
T [ 5 7 16 19 9 4 2 2 1 26 31 9 8 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0114.1 MA0114 1 HNF4A RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
MA0114.2 MA0114 2 HNF4A Homo sapiens
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
MA0114.3 MA0114 3 Hnf4a Mus musculus
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
MA0114.4 MA0114 4 HNF4A Homo sapiens
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
MA0114.5 MA0114 5 HNF4A Homo sapiens
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Symbol:

Consensus:

Included Models:

GC Content: