Detailed information of matrix profile MA0131.2

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Profile summary
Name: HINFP
Matrix ID: MA0131.2
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 14752047
Uniprot ID: Q9BQA5  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 23 285 276 1 0 0 0 0 0 1 85 77 ]
C [ 340 131 45 388 14 0 404 413 31 395 55 84 ]
G [ 106 113 217 97 484 0 13 0 472 15 188 154 ]
T [ 100 53 17 7 10 470 0 3 21 12 97 107 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0131.1 MA0131 1 HINFP Homo sapiens
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
MA0131.2 MA0131 2 HINFP Homo sapiens
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
MA0131.3 MA0131 3 HINFP Homo sapiens
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: