Detailed information of matrix profile MA0154.3

  1. Home
  2. Matrix > MA0154.3

Profile summary
Name: EBF1
Matrix ID: MA0154.3
Class: Rel homology region (RHR) factors
Family: Early B-Cell Factor-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 17916232
Uniprot ID: Q9UH73  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1110 257 37 0 3 0 562 777 21 107 6 1544 604 250 ]
C [ 115 276 232 1544 1544 1544 391 77 6 8 0 17 586 364 ]
G [ 166 334 0 3 4 0 63 208 1544 1544 1544 84 145 81 ]
T [ 153 678 1544 1 18 6 529 482 0 0 22 24 209 849 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0154.1 MA0154 1 EBF1 Mus musculus
Early B-Cell Factor-related factors Rel homology region (RHR) factors
MA0154.2 MA0154 2 EBF1 Homo sapiens
Early B-Cell Factor-related factors Rel homology region (RHR) factors
MA0154.3 MA0154 3 EBF1 Homo sapiens
Early B-Cell Factor-related factors Rel homology region (RHR) factors
MA0154.4 MA0154 4 EBF1 Homo sapiens
Early B-Cell Factor-related factors Rel homology region (RHR) factors
MA0154.5 MA0154 5 EBF1 Homo sapiens
Early B-Cell Factor-related factors Rel homology region (RHR) factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0019.1

ChIP-seq Centrality
-log(P-value): 19336.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0019.1

ChIP-seq Centrality
-log(P-value): 19565.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: