Detailed information of matrix profile MA0554.2

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Profile summary
Name: SOC1
Matrix ID: MA0554.2
Class: MADS box factors
Family: Type II
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8774892
Uniprot ID: O64645  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 183 14 641 766 858 752 673 336 262 0 635 775 762 ]
C [ 665 683 86 0 0 0 0 56 9 13 89 51 34 ]
G [ 23 10 71 24 8 6 78 37 617 855 47 0 27 ]
T [ 17 181 90 98 22 130 137 459 0 20 117 62 65 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0554.1 MA0554 1 SOC1 Arabidopsis thaliana
Type II MADS box factors
MA0554.2 MA0554 2 SOC1 Arabidopsis thaliana
Type II MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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