Detailed information of matrix profile MA0555.2

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Profile summary
Name: SVP
Matrix ID: MA0555.2
Class: MADS box factors
Family: Type II
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8774892
Uniprot ID: Q9FVC1  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 28 28 33 7 3 58 67 86 77 78 34 16 0 71 84 77 ]
C [ 11 1 16 85 79 16 5 0 1 8 10 0 0 10 2 7 ]
G [ 8 10 11 0 1 7 8 0 2 3 14 74 92 0 2 2 ]
T [ 45 53 32 0 9 11 12 6 12 3 34 2 0 11 4 6 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0555.1 MA0555 1 SVP Arabidopsis thaliana
Type II MADS box factors
MA0555.2 MA0555 2 SVP Arabidopsis thaliana
Type II MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: