Detailed information of matrix profile MA0556.1

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Profile summary
Name: AP3
Matrix ID: MA0556.1
Class: MADS box factors
Family: MIKC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 8774892
Uniprot ID: P35632  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 20 33 47 0 0 166 21 50 8 41 34 58 2 135 143 ]
C [ 19 9 5 284 191 30 104 0 0 11 11 1 0 39 20 ]
G [ 9 18 56 0 2 0 10 1 0 22 61 232 241 33 36 ]
T [ 243 231 183 7 98 95 156 240 283 217 185 0 48 84 92 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0556.1 MA0556 1 AP3 Arabidopsis thaliana
MIKC MADS box factors
MA0556.2 MA0556 2 AP3 Arabidopsis thaliana
Type II MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: