Detailed information of matrix profile MA0734.2

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Profile summary
Name: GLI2
Matrix ID: MA0734.2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 2105456
Uniprot ID: P10070  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 5234 88 14096 0 0 15762 0 3319 167 16175 1207 3354 7613 4438 503 ]
C [ 4901 215 2886 16427 16442 675 16444 15079 16216 7 15453 4113 1810 9203 1257 ]
G [ 4702 15957 1758 0 0 97 0 0 13 539 694 13225 3253 1368 15481 ]
T [ 1607 728 0 8 1 302 0 0 152 24 841 1146 7647 5871 777 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0734.1 MA0734 1 GLI2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0734.2 MA0734 2 GLI2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0734.3 MA0734 3 Gli2 Mus musculus
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0734.4 MA0734 4 Gli2 Mus musculus
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: