Detailed information of matrix profile MA0735.1

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Profile summary
Name: GLIS1
Matrix ID: MA0735.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 22391303
Uniprot ID: Q8NBF1  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 1029 24 2786 2024 51 0 6 2 7 2 0 3 0 8 1016 891 ]
C [ 1344 9572 0 32 10081 0 160 5 0 5 11 2 2 6 8617 100 ]
G [ 3054 5 1340 4 0 4549 3 4505 4702 4817 4796 4769 4807 0 44 1842 ]
T [ 857 7 2846 5759 7 0 6781 6 0 3 0 4 0 6314 3 3236 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0735.1 MA0735 1 GLIS1 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0735.2 MA0735 2 GLIS1 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0492.1

ChIP-seq Centrality
-log(P-value): 10169.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0492.1

ChIP-seq Centrality
-log(P-value): 8115.65

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: