Detailed information of matrix profile MA0739.1

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Profile summary
Name: Hic1
Matrix ID: MA0739.1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 15231840
Uniprot ID: Q9R1Y5  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 6337 62 950 50 88 9008 6140 1220 1610 ]
C [ 719 422 588 11007 11007 1999 1986 11007 4822 ]
G [ 4670 73 11007 121 31 3 2267 1629 1884 ]
T [ 666 11007 183 0 68 317 614 1488 2692 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0739.1 MA0739 1 Hic1 Mus musculus
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
MA0739.2 MA0739 2 Hic1 Mus musculus
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: