Detailed information of matrix profile MA0769.1

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Profile summary
Name: Tcf7
Matrix ID: MA0769.1
Class: High-mobility group (HMG) domain factors
Family: TCF-7-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 16710294
Uniprot ID: Q00417  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 552 791 906 5 912 0 21 919 921 915 32 159 ]
C [ 68 31 4 277 2 5 1018 0 6 0 0 146 ]
G [ 117 144 27 744 4 18 28 5 10 0 846 600 ]
T [ 97 111 31 6 42 874 21 6 3 4 0 89 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0769.1 MA0769 1 Tcf7 Mus musculus
TCF-7-related factors High-mobility group (HMG) domain factors
MA0769.2 MA0769 2 TCF7 Homo sapiens
TCF-7-related factors High-mobility group (HMG) domain factors
MA0769.3 MA0769 3 TCF7 Homo sapiens
TCF-7-related factors High-mobility group (HMG) domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0209.1

ChIP-seq Centrality
-log(P-value): 1610.64

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0209.1

ChIP-seq Centrality
-log(P-value): 1608.29

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: