Detailed information of matrix profile MA0802.2

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Profile summary
Name: TBR1
Matrix ID: MA0802.2
Class: T-Box factors
Family: TBrain-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 12093383
Uniprot ID: Q16650  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 34509 6880 70 39 0 2386 1175 34509 25869 ]
C [ 359 3255 254 1759 6 4742 2551 90 2575 ]
G [ 3329 34509 34509 88 34509 157 34509 584 1488 ]
T [ 1433 4480 213 34509 4 34509 7001 205 4576 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0802.1 MA0802 1 TBR1 Homo sapiens
TBrain-related factors T-Box factors
MA0802.2 MA0802 2 TBR1 Homo sapiens
TBrain-related factors T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: