Detailed information of matrix profile MA0815.1

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Profile summary
Name: TFAP2C
Matrix ID: MA0815.1
Class: Basic helix-span-helix factors (bHSH)
Family: AP-2
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 16420676
Uniprot ID: Q92754  
Source: 23332764
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 532 0 0 0 17 89 365 1013 380 0 0 0 1282 ]
C [ 350 659 2496 2408 2073 1001 913 362 110 0 0 2128 174 ]
G [ 215 2379 0 0 95 404 924 984 2359 3082 3137 519 343 ]
T [ 1466 0 0 0 330 1217 425 73 20 0 0 0 435 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0815.1 MA0815 1 TFAP2C Homo sapiens
AP-2 Basic helix-span-helix factors (bHSH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0211.1

ChIP-seq Centrality
-log(P-value): 36573.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0211.1

ChIP-seq Centrality
-log(P-value): 36690.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: